Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Pde1c ENSRNOG00000012337

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Description

phosphodiesterase 1C [Source:RGD Symbol;Acc:68332]

Location

Primary_assembly 4: 86,626,282-87,193,259 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 10 transcripts (splice variants), 270 orthologues, 20 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000105428.2	Pde1c-205	3183	863aa	ENSRNOP00000078829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZM70	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000121103.1	Pde1c-207	3421	788aa	ENSRNOP00000110688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000118567.2	Pde1c-206	3282	693aa	ENSRNOP00000089783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8V6	-
ENSRNOT00000098186.2	Pde1c-203	2993	751aa	ENSRNOP00000096395.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQQ1	-
ENSRNOT00000098034.2	Pde1c-202	2876	624aa	ENSRNOP00000077659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y1F5	-
ENSRNOT00000017531.9	Pde1c-201	2864	708aa	ENSRNOP00000017531.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K105 F1LMX4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000152371.1	Pde1c-209	2819	605aa	ENSRNOP00000105005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKK2	-
ENSRNOT00000102583.2	Pde1c-204	2503	768aa	ENSRNOP00000095937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMU0	-
ENSRNOT00000146532.1	Pde1c-208	2396	716aa	ENSRNOP00000099233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000167670.1	Pde1c-210	2210	665aa	ENSRNOP00000099194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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