Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Itprid1 ENSRNOG00000012165

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Description

ITPR interacting domain containing 1 [Source:RGD Symbol;Acc:1561131]

Gene Synonyms

Ccdc129, LOC500139, RGD1561131

Location

Primary_assembly 4: 86,345,724-86,505,818 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 3 transcripts (splice variants), 138 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112978.2	Itprid1-203	6634	1028aa	ENSRNOP00000094916.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000081561.3	Itprid1-202	6562	1004aa	ENSRNOP00000069569.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVP6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000045930.7	Itprid1-201	6198	949aa	ENSRNOP00000046662.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZPH2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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