Gene: Snrnp200 ENSRNOG00000012157

Description

small nuclear ribonucleoprotein U5 subunit 200 [Source:RGD Symbol;Acc:1561120]

Gene Synonyms

Ascc3l1, LOC296126, MGC116386, U5-200KD

Location

mRatBN7.2:CM026976.1

About this gene

This gene has 2 transcripts (splice variants), 212 orthologues, 8 paralogues and is associated with 8 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000043895.5	Snrnp200-201	6786	2139aa	ENSRNOP00000048598.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNJ2 M3ZCQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000096127.1	Snrnp200-202	6780	2137aa	ENSRNOP00000097906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ATU8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary