Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Saal1 ENSRNOG00000011895

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Description

serum amyloid A-like 1 [Source:RGD Symbol;Acc:1587443]

Gene Synonyms

LOC691143

Location

Primary_assembly 1: 106,335,081-106,358,751 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 5 transcripts (splice variants), 158 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000016254.7	Saal1-201	1836	611aa	ENSRNOP00000016254.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7TP01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000079553.3	Saal1-202	1594	471aa	ENSRNOP00000069179.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JUP9	-
ENSRNOT00000145708.1	Saal1-205	1453	454aa	ENSRNOP00000099805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000131347.1	Saal1-203	1368	429aa	ENSRNOP00000107513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000141977.1	Saal1-204	877	182aa	ENSRNOP00000102333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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