Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Washc2c ENSRNOG00000011653

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Description

WASH complex subunit 2C [Source:RGD Symbol;Acc:735230]

Gene Synonyms

Fam21, Fam21c, LOC297530, NP61201, Washc2

Location

Primary_assembly 4: 150,912,395-150,998,301 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 10 transcripts (splice variants), 191 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000147561.1	Washc2c-208	4422	1328aa	ENSRNOP00000112244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000145718.1	Washc2c-207	4384	1293aa	ENSRNOP00000108411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000107747.2	Washc2c-204	4279	1319aa	ENSRNOP00000079185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQB3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000015620.8	Washc2c-201	4243	1307aa	ENSRNOP00000015620.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LPG9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000120180.2	Washc2c-205	4243	1307aa	ENSRNOP00000090531.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADQ6	-
ENSRNOT00000163668.1	Washc2c-209	4243	1307aa	ENSRNOP00000104973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000163825.1	Washc2c-210	4216	1298aa	ENSRNOP00000112282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000100585.2	Washc2c-203	4204	1294aa	ENSRNOP00000096602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM40	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000092689.3	Washc2c-202	4136	937aa	ENSRNOP00000088489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AA25	-
ENSRNOT00000132101.1	Washc2c-206	3952	1210aa	ENSRNOP00000110347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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