Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cab39l ENSRNOG00000011603

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Description

calcium binding protein 39-like [Source:RGD Symbol;Acc:1308945]

Gene Synonyms

LOC290291

Location

Primary_assembly 15: 37,782,870-37,919,742 forward strand.

GRCr8:CM070405.1

About this gene

This gene has 4 transcripts (splice variants), 208 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000016162.8	Cab39l-201	1385	337aa	ENSRNOP00000016162.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FIZ4 Q5XIJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000103841.2	Cab39l-204	2264	184aa	ENSRNOP00000097582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AS34	-
ENSRNOT00000096654.2	Cab39l-203	1237	306aa	ENSRNOP00000091817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACT7	-
ENSRNOT00000084505.3	Cab39l-202	1118	296aa	ENSRNOP00000068564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JT45 A6K678	-

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Summary

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