Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Lrrc40 ENSRNOG00000011555

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Description

leucine rich repeat containing 40 [Source:RGD Symbol;Acc:1562017]

Gene Synonyms

LOC310946, MGC125134

Location

Primary_assembly 2: 249,760,354-249,791,265 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000108065.2	Lrrc40-202	3997	602aa	ENSRNOP00000095464.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GL58 A6HWT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000121543.1	Lrrc40-204	3931	479aa	ENSRNOP00000103242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HWU1	-
ENSRNOT00000115272.2	Lrrc40-203	2529	566aa	ENSRNOP00000091411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEF1	-
ENSRNOT00000015434.8	Lrrc40-201	2458	461aa	ENSRNOP00000015434.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V7I7	-

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Summary

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