Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Vta1 ENSRNOG00000011540

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Description

vesicle trafficking 1 [Source:RGD Symbol;Acc:1305031]

Gene Synonyms

LOC292640, Lip5, MGC112826, RGD1305031

Location

Primary_assembly 1: 10,852,966-10,900,735 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000075850.4	Vta1-202	1316	309aa	ENSRNOP00000068514.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKH2 A0A8I6A5Y0 A6JP73	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000064836.3	Vta1-201	1221	251aa	ENSRNOP00000061074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4KM55	-

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Summary

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