Gene: Ccdc39 ENSRNOG00000011440

Description

coiled-coil domain containing 39 [Source:RGD Symbol;Acc:1306277]

Gene Synonyms

LOC310315, RGD1306277

Location

mRatBN7.2:CM026975.1

About this gene

This gene has 2 transcripts (splice variants), 202 orthologues and is associated with 26 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000084521.2	Ccdc39-202	3990	934aa	ENSRNOP00000069773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z8K2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000065469.3	Ccdc39-201	3865	927aa	ENSRNOP00000061948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0A0MY52	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary