Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gabpb1 ENSRNOG00000010659

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Description

GA binding protein transcription factor subunit beta 1 [Source:RGD Symbol;Acc:1560391]

Gene Synonyms

LOC499883, RGD1560391

Location

Primary_assembly 3: 134,333,339-134,361,344 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 2 transcripts (splice variants), 141 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000045443.7	Gabpb1-201	2482	349aa	ENSRNOP00000045035.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWD2 F7FDI9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000109155.2	Gabpb1-202	2347	304aa	ENSRNOP00000078447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4KM28	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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