Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tbc1d5 ENSRNOG00000010637

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Description

TBC1 domain family, member 5 [Source:RGD Symbol;Acc:1561626]

Gene Synonyms

LOC501088, RGD1561626

Location

Primary_assembly 9: 3,750,325-4,253,581 reverse strand.

GRCr8:CM070399.1

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083387.3	Tbc1d5-202	4109	827aa	ENSRNOP00000074017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K712	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000014171.8	Tbc1d5-201	4043	805aa	ENSRNOP00000014171.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M9Q1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000112471.2	Tbc1d5-203	4034	802aa	ENSRNOP00000094871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMF2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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