Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Scube1 ENSRNOG00000010617

.

Description

signal peptide, CUB domain and EGF like domain containing 1 [Source:RGD Symbol;Acc:1309015]

Gene Synonyms

LOC315174

Location

Primary_assembly 7: 116,642,231-116,760,944 reverse strand.

GRCr8:CM070397.1

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000017727.7	Scube1-201	4237	1018aa	ENSRNOP00000017727.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M987	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000103478.2	Scube1-202	4111	976aa	ENSRNOP00000096909.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMT3	-
ENSRNOT00000150495.1	Scube1-204	3949	922aa	ENSRNOP00000100334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000112140.2	Scube1-203	3904	907aa	ENSRNOP00000088785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5S5	-

.

Summary

.

.