Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Map7d1 ENSRNOG00000010237

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Description

MAP7 domain containing 1 [Source:RGD Symbol;Acc:1597986]

Gene Synonyms

LOC681287, Mtap7d1

Location

Primary_assembly 5: 143,811,924-143,837,021 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 4 transcripts (splice variants), 262 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000115338.2	Map7d1-203	3380	849aa	ENSRNOP00000078898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZM56-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000065871.3	Map7d1-201	3284	817aa	ENSRNOP00000061878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6ISA0 D4A644	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000108369.2	Map7d1-202	3269	812aa	ENSRNOP00000077561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZM56-2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000116167.2	Map7d1-204	2739	828aa	ENSRNOP00000090203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMK3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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