Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Prrc2b ENSRNOG00000010217

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Description

proline-rich coiled-coil 2B [Source:RGD Symbol;Acc:1595906]

Gene Synonyms

Bat2l, LOC296637

Location

Primary_assembly 3: 35,863,046-35,916,854 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000066368.6	Prrc2b-202	10618	2240aa	ENSRNOP00000063117.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZZ51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000088576.3	Prrc2b-203	8532	1558aa	ENSRNOP00000075535.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KAU9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000013546.8	Prrc2b-201	7602	2181aa	ENSRNOP00000013546.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZY45	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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