Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Rara ENSRNOG00000009972

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Description

retinoic acid receptor, alpha [Source:RGD Symbol;Acc:3534]

Location

Primary_assembly 10: 84,389,622-84,425,160 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 3 transcripts (splice variants), 330 orthologues, 19 paralogues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000084644.3	Rara-202	3258	462aa	ENSRNOP00000069776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JW78 A6HIV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000008659.6	Rara-201	3193	459aa	ENSRNOP00000008659.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HIV9 F7EXR0	-
ENSRNOT00000168609.1	Rara-203	2836	445aa	ENSRNOP00000098789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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