Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Snx16 ENSRNOG00000009953

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Description

sorting nexin 16 [Source:RGD Symbol;Acc:620295]

Location

Primary_assembly 2: 91,336,092-91,357,619 forward strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 4 transcripts (splice variants), 237 orthologues, 1 paralogue and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083909.2	Snx16-202	2193	344aa	ENSRNOP00000068566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JT47 P57769	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000050987.5	Snx16-201	2168	304aa	ENSRNOP00000041690.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QN20	-
ENSRNOT00000096600.1	Snx16-203	2089	271aa	ENSRNOP00000093980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL47	-
ENSRNOT00000108035.1	Snx16-204	1603	202aa	ENSRNOP00000088326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4W4	-

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Summary

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