Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Pls1 ENSRNOG00000009945

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Description

plastin 1 [Source:RGD Symbol;Acc:1307142]

Gene Synonyms

LOC315926, MGC189074

Location

Primary_assembly 8: 105,197,455-105,292,447 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues, 2 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000013209.9	Pls1-201	2571	637aa	ENSRNOP00000013209.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2QC04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000147926.1	Pls1-203	2589	630aa	ENSRNOP00000106829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000147660.1	Pls1-202	1993	570aa	ENSRNOP00000109076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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