Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tmod1 ENSRNOG00000009761

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Description

tropomodulin 1 [Source:RGD Symbol;Acc:3874]

Gene Synonyms

E-Tmod, Tmod

Location

Primary_assembly 5: 65,134,132-65,189,561 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues, 6 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000013228.6	Tmod1-201	2531	359aa	ENSRNOP00000013228.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJA9 F7ELP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000109364.2	Tmod1-202	2513	352aa	ENSRNOP00000076573.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YBE0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000113823.2	Tmod1-203	2476	326aa	ENSRNOP00000077344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKA1	-

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Summary

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