Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Palm ENSRNOG00000009760

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Description

paralemmin [Source:RGD Symbol;Acc:620341]

Location

Primary_assembly 7: 9,886,643-9,912,555 reverse strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 4 transcripts (splice variants), 233 orthologues, 3 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114530.1	Palm-203	2536	386aa	ENSRNOP00000080900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G597	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110910.1	Palm-202	3299	383aa	ENSRNOP00000096200.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AUR8	-
ENSRNOT00000013762.8	Palm-201	2625	383aa	ENSRNOP00000013762.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q920Q0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000117256.1	Palm-204	572	176aa	ENSRNOP00000093376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJZ7	-

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Summary

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