Gene: Sdcbp ENSRNOG00000009683

Description

syndecan binding protein [Source:RGD Symbol;Acc:621497]

Gene Synonyms

LOC108350925, TACIP18, mda-9

Location

Primary_assembly 5: 24,245,033-24,326,197 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 6 transcripts (splice variants), 181 orthologues, 4 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000137222.1	Sdcbp-205	2568	356aa	ENSRNOP00000106015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000115856.2	Sdcbp-204	2418	306aa	ENSRNOP00000081603.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JI92	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000098340.2	Sdcbp-202	2342	300aa	ENSRNOP00000079793.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G5R4	-
ENSRNOT00000162656.1	Sdcbp-206	2189	296aa	ENSRNOP00000100964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000013563.9	Sdcbp-201	2008	278aa	ENSRNOP00000013563.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q6V7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000110124.2	Sdcbp-203	937	199aa	ENSRNOP00000084825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1Z6	-

Gene: Sdcbp ENSRNOG00000009683

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Gene: Sdcbp ENSRNOG00000009683

Summary

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