Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Stox2 ENSRNOG00000009590

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Description

storkhead box 2 [Source:RGD Symbol;Acc:708477]

Gene Synonyms

LOC286760

Location

Primary_assembly 16: 44,848,078-45,085,105 forward strand.

mRatBN7.2:CM026989.1

About this gene

This gene has 4 transcripts (splice variants), 277 orthologues, 1 paralogue and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117134.1	Stox2-204	7564	927aa	ENSRNOP00000082453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000094426.1	Stox2-203	8313	863aa	ENSRNOP00000078362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G2M9	-
ENSRNOT00000068562.3	Stox2-201	5694	926aa	ENSRNOP00000063517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A001	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000090839.2	Stox2-202	4208	879aa	ENSRNOP00000071628.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0Y3	-

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Summary

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