Gene: Ptcd3 ENSRNOG00000009484

Description

Pentatricopeptide repeat domain 3 [Source:RGD Symbol;Acc:1565582]

Gene Synonyms

LOC500199, MGC112724

Location

Primary_assembly 4: 105,480,709-105,513,276 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 7 transcripts (splice variants), 203 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000118960.2	Ptcd3-207	2953	747aa	ENSRNOP00000097950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ANU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000117113.2	Ptcd3-205	2917	735aa	ENSRNOP00000077319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZK99	-
ENSRNOT00000094038.2	Ptcd3-204	2896	728aa	ENSRNOP00000080568.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G4Q3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000078991.3	Ptcd3-203	2633	690aa	ENSRNOP00000068923.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JU15	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000117174.2	Ptcd3-206	2484	657aa	ENSRNOP00000095509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ANP8	-
ENSRNOT00000012622.9	Ptcd3-201	2313	651aa	ENSRNOP00000012622.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZGM1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000078123.3	Ptcd3-202	1954	230aa	ENSRNOP00000070424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4KM70	-

Gene: Ptcd3 ENSRNOG00000009484

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Ptcd3 ENSRNOG00000009484

Summary

About Us

Get help

Our sister sites

Follow us