tripartite motif-containing 13 [Source:RGD Symbol;Acc:1307609]
LOC364398
Primary_assembly 15: 39,902,284-39,958,892 forward strand.
GRCr8:CM070405.1
This gene has 10 transcripts (splice variants), 209 orthologues and 62 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSRNOT00000012035.6 | Trim13-201 | 1549 | 445aa | ENSRNOP00000012035.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8L2UIK6 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSRNOT00000110181.2 | Trim13-204 | 8506 | 407aa | ENSRNOP00000080518.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I5ZQ82 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSRNOT00000148787.1 | Trim13-209 | 7117 | 407aa | ENSRNOP00000110005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSRNOT00000122923.1 | Trim13-207 | 4019 | 407aa | ENSRNOP00000110201.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSRNOT00000167033.1 | Trim13-210 | 3996 | 407aa | ENSRNOP00000099165.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSRNOT00000143561.1 | Trim13-208 | 3987 | 407aa | ENSRNOP00000108511.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSRNOT00000116555.2 | Trim13-206 | 3155 | 407aa | ENSRNOP00000086916.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5M7V1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSRNOT00000107093.2 | Trim13-202 | 3037 | 407aa | ENSRNOP00000096302.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5M7V1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSRNOT00000109510.2 | Trim13-203 | 3030 | 407aa | ENSRNOP00000092048.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5M7V1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSRNOT00000112782.2 | Trim13-205 | 2808 | 407aa | ENSRNOP00000078168.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5M7V1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
