Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Rtkn ENSRNOG00000009022

.

Description

rhotekin [Source:RGD Symbol;Acc:727874]

Gene Synonyms

LOC103692165

Location

Primary_assembly 4: 117,198,647-117,215,660 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 6 transcripts (splice variants), 196 orthologues, 3 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000079547.3	Rtkn-203	2612	605aa	ENSRNOP00000069449.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UPK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000031964.6	Rtkn-201	2756	548aa	ENSRNOP00000032233.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6V7V2-1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000118500.2	Rtkn-205	2729	539aa	ENSRNOP00000081167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G5K4	-
ENSRNOT00000101909.2	Rtkn-204	2265	561aa	ENSRNOP00000092765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIK7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000079511.3	Rtkn-202	2063	317aa	ENSRNOP00000075723.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KBB1	-
ENSRNOT00000124729.1	Rtkn-206	1939	491aa	ENSRNOP00000099265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.