Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Nfx1 ENSRNOG00000009015

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Description

nuclear transcription factor, X-box binding 1 [Source:RGD Symbol;Acc:1310277]

Gene Synonyms

LOC313166

Location

Primary_assembly 5: 60,901,217-60,958,889 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 6 transcripts (splice variants), 211 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000160551.1	Nfx1-206	4079	1128aa	ENSRNOP00000108253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000060692.6	Nfx1-202	4631	1114aa	ENSRNOP00000057423.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IIT2 D4AE50	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000108374.2	Nfx1-204	4411	1089aa	ENSRNOP00000093949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMR9	-
ENSRNOT00000105959.2	Nfx1-203	4329	818aa	ENSRNOP00000096312.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALJ0 Q4V7B3	-
ENSRNOT00000157209.1	Nfx1-205	3271	1021aa	ENSRNOP00000108823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000060691.5	Nfx1-201	2560	804aa	ENSRNOP00000057422.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7F8T5	-

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Summary

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