Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Map3k6 ENSRNOG00000008936

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Description

mitogen-activated protein kinase kinase kinase 6 [Source:RGD Symbol;Acc:1304625]

Gene Synonyms

LOC313022

Location

Primary_assembly 5: 150,724,216-150,736,111 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 2 transcripts (splice variants), 189 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000012463.7	Map3k6-201	4366	1292aa	ENSRNOP00000012463.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6ISW1 D3ZFL3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000093926.2	Map3k6-202	4342	1284aa	ENSRNOP00000080621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZR53	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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