Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Sytl1 ENSRNOG00000008600

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Description

synaptotagmin-like 1 [Source:RGD Symbol;Acc:1310715]

Gene Synonyms

LOC297872, MGC112642, Slp-1

Location

Primary_assembly 5: 150,736,425-150,746,840 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 4 transcripts (splice variants), 175 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087836.3	Sytl1-202	1890	566aa	ENSRNOP00000072343.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2R4 A6ISW2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000064472.4	Sytl1-201	2035	544aa	ENSRNOP00000061610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4KMA1	-
ENSRNOT00000148568.1	Sytl1-204	1778	546aa	ENSRNOP00000108488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000108049.2	Sytl1-203	1695	501aa	ENSRNOP00000088473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A563	-

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Summary

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