Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gsg1 ENSRNOG00000008518

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Description

germ cell associated 1 [Source:RGD Symbol;Acc:1306546]

Gene Synonyms

LOC312793

Location

Primary_assembly 4: 169,822,114-169,838,379 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 4 transcripts (splice variants), 148 orthologues, 9 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000011295.6	Gsg1-201	1349	382aa	ENSRNOP00000011295.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AYL2-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000134424.1	Gsg1-204	1371	366aa	ENSRNOP00000108927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IMG2	-
ENSRNOT00000113676.2	Gsg1-203	1225	369aa	ENSRNOP00000092262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADC1	-
ENSRNOT00000107520.2	Gsg1-202	1019	315aa	ENSRNOP00000089420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACL7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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