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- Splice variants
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Gene: Iqch ENSRNOG00000008353

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Description

IQ motif containing H [Source:RGD Symbol;Acc:1310670]

Gene Synonyms

LOC300776, RGD1310670

Location

Primary_assembly 8: 72,787,756-72,978,598 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 5 transcripts (splice variants), 186 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000011109.7	Iqch-201	3663	1085aa	ENSRNOP00000011109.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A855	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000108348.2	Iqch-204	3579	1057aa	ENSRNOP00000081929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G6Q5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000108674.2	Iqch-205	3501	1031aa	ENSRNOP00000086417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GE13	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000098188.2	Iqch-202	3495	1029aa	ENSRNOP00000079586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNU2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000100995.2	Iqch-203	2916	836aa	ENSRNOP00000084582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZF3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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