Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Thumpd2 ENSRNOG00000008291

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Description

THUMP domain containing 2 [Source:RGD Symbol;Acc:1306878]

Gene Synonyms

LOC313851, MGC108999

Location

Primary_assembly 6: 19,677,025-19,739,317 forward strand.

GRCr8:CM070396.1

About this gene

This gene has 4 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087891.3	Thumpd2-203	1966	586aa	ENSRNOP00000075202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KA02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000011000.7	Thumpd2-201	1834	549aa	ENSRNOP00000011000.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A475	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000084499.3	Thumpd2-202	1693	502aa	ENSRNOP00000071513.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5FVM9	-
ENSRNOT00000100728.2	Thumpd2-204	1597	490aa	ENSRNOP00000086376.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3I0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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