Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Ontologies
- GO: Anatomical entity
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Gene: Synpr ENSRNOG00000008203

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Description

synaptoporin [Source:RGD Symbol;Acc:708366]

Gene Synonyms

LOC66030

Location

Primary_assembly 15: 14,004,715-14,330,848 reverse strand.

GRCr8:CM070405.1

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000100360.2	Synpr-203	1686	326aa	ENSRNOP00000076574.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZK40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000127244.1	Synpr-205	1697	323aa	ENSRNOP00000106750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000121623.1	Synpr-204	1663	273aa	ENSRNOP00000109668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000011307.7	Synpr-201	1586	265aa	ENSRNOP00000011307.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K083 P22831	-
ENSRNOT00000086502.3	Synpr-202	1318	263aa	ENSRNOP00000071839.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1H2	-

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Summary

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