Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tmeff1 ENSRNOG00000008034

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Description

transmembrane protein with EGF-like and two follistatin-like domains 1 [Source:RGD Symbol;Acc:62005]

Gene Synonyms

TR-1

Location

Primary_assembly 5: 67,706,269-67,792,021 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 5 transcripts (splice variants), 125 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000065775.4	Tmeff1-201	2481	373aa	ENSRNOP00000063443.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9QYV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000107282.2	Tmeff1-202	2478	372aa	ENSRNOP00000077629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y818	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000119982.2	Tmeff1-204	2175	351aa	ENSRNOP00000087556.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3D5	-
ENSRNOT00000113773.2	Tmeff1-203	2106	350aa	ENSRNOP00000095093.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMC8	-
ENSRNOT00000136411.1	Tmeff1-205	1680	362aa	ENSRNOP00000103683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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