Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Spmap2 ENSRNOG00000007960

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Description

sperm microtubule associated protein 2 [Source:RGD Symbol;Acc:1309240]

Gene Synonyms

LOC299599, Theg

Location

Primary_assembly 7: 10,778,015-10,788,155 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 3 transcripts (splice variants), 108 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000010549.9	Spmap2-201	1332	378aa	ENSRNOP00000010549.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XHX8-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000104430.2	Spmap2-203	1268	354aa	ENSRNOP00000091522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGA2 A6K901	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000042792.6	Spmap2-202	1187	340aa	ENSRNOP00000044536.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XHX8-2	-

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Summary

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