Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Kif3a ENSRNOG00000007515

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Description

kinesin family member 3a [Source:RGD Symbol;Acc:621536]

Location

Primary_assembly 10: 37,725,970-37,759,191 forward strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 5 transcripts (splice variants), 209 orthologues, 44 paralogues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000009999.8	Kif3a-201	2351	726aa	ENSRNOP00000009999.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQZ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000111035.1	Kif3a-205	2807	684aa	ENSRNOP00000096108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL48	-
ENSRNOT00000110159.1	Kif3a-204	2658	686aa	ENSRNOP00000096291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AP89	-
ENSRNOT00000096824.1	Kif3a-203	2622	674aa	ENSRNOP00000085263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GCQ1	-
ENSRNOT00000077569.2	Kif3a-202	2500	701aa	ENSRNOP00000069057.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JUD6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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