Summary
- Splice variants
- Transcript comparison
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Gene: Krba1 ENSRNOG00000007405

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Description

KRAB-A domain containing 1 [Source:RGD Symbol;Acc:1306967]

Gene Synonyms

LOC362358, RGD1306967

Location

Primary_assembly 4: 78,672,400-78,693,987 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 5 transcripts (splice variants) and 90 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000140896.1	Krba1-205	4123	1154aa	ENSRNOP00000099987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000117955.2	Krba1-203	4036	1123aa	ENSRNOP00000097535.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASV2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000140223.1	Krba1-204	3993	1082aa	ENSRNOP00000111085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000043856.7	Krba1-201	3976	1103aa	ENSRNOP00000040855.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A2C1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000116168.2	Krba1-202	3772	1035aa	ENSRNOP00000083665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZXE9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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