Summary
- Splice variants
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Sequence
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Comparative Genomics
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- Orthologues
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- GO: Molecular function
- GO: Biological process
- GO: Cellular component
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Genetic Variation
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Gene: Necab1 ENSRNOG00000007256

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Description

N-terminal EF-hand calcium binding protein 1 [Source:RGD Symbol;Acc:708548]

Gene Synonyms

Efcbp1, Stip-1

Location

Primary_assembly 5: 33,126,632-33,174,768 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 4 transcripts (splice variants) and 92 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000138354.1	Necab1-202	656	137aa	ENSRNOP00000112074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000009718.8	Necab1-201	1404	80aa	ENSRNOP00000009718.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q4C3	-
ENSRNOT00000139380.1	Necab1-203	940	131aa	ENSRNOP00000100605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000162817.1	Necab1-204	802	136aa	ENSRNOP00000102971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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