Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Cntn5 ENSRNOG00000007038

.

Description

contactin 5 [Source:RGD Symbol;Acc:621302]

Gene Synonyms

Nb-2

Location

Primary_assembly 8: 15,018,927-15,969,060 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues, 35 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000009418.9	Cntn5-201	3586	1099aa	ENSRNOP00000009418.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JN62 F1M173 P97527	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000162546.1	Cntn5-203	4471	1067aa	ENSRNOP00000109036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000163383.1	Cntn5-204	3369	1046aa	ENSRNOP00000101480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000103707.2	Cntn5-202	2702	893aa	ENSRNOP00000093216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFE0	-

.

Summary

.

.