Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Casq1 ENSRNOG00000006930

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Description

calsequestrin 1 [Source:RGD Symbol;Acc:1586677]

Gene Synonyms

LOC686019

Location

Primary_assembly 13: 87,202,485-87,213,463 reverse strand.

GRCr8:CM070403.1

About this gene

This gene has 2 transcripts (splice variants), 263 orthologues, 1 paralogue and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000009344.8	Casq1-201	2005	484aa	ENSRNOP00000009344.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19633	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000152763.1	Casq1-202	2310	381aa	ENSRNOP00000110096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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