Summary
- Splice variants
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- GO: Cellular component
- GO: Molecular function
- GO: Biological process
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Gene: Vps53 ENSRNOG00000006895

Description

VPS53 subunit of GARP complex [Source:RGD Symbol;Acc:1311391]

Gene Synonyms

LOC287535, RGD1311391

Location

Primary_assembly 10: 60,919,820-61,038,676 reverse strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 6 transcripts (splice variants), 217 orthologues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096693.1	Vps53-203	2986	838aa	ENSRNOP00000096444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000010010.5	Vps53-201	2805	832aa	ENSRNOP00000010010.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZPE5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000099955.1	Vps53-204	2716	807aa	ENSRNOP00000081957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUQ6	-
ENSRNOT00000082825.2	Vps53-202	2667	803aa	ENSRNOP00000074043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4F763	-
ENSRNOT00000116582.1	Vps53-206	2614	812aa	ENSRNOP00000096750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B4Q5	-
ENSRNOT00000112514.1	Vps53-205	2274	655aa	ENSRNOP00000089534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GI69	-

Gene: Vps53 ENSRNOG00000006895

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Gene: Vps53 ENSRNOG00000006895

Summary

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