Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Smyd1 ENSRNOG00000006776

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Description

SET and MYND domain containing 1 [Source:RGD Symbol;Acc:1305105]

Gene Synonyms

LOC297333

Location

Primary_assembly 4: 104,760,475-104,870,081 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 6 transcripts (splice variants), 285 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000009184.7	Smyd1-201	2146	490aa	ENSRNOP00000009184.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IA68 D4A3D2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000094006.2	Smyd1-203	2297	450aa	ENSRNOP00000077690.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YCG5	-
ENSRNOT00000128930.1	Smyd1-206	2223	457aa	ENSRNOP00000101538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000097634.2	Smyd1-204	2206	446aa	ENSRNOP00000093849.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKQ9	-
ENSRNOT00000119454.2	Smyd1-205	2053	459aa	ENSRNOP00000086450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A681	-
ENSRNOT00000093960.2	Smyd1-202	1995	456aa	ENSRNOP00000097130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQZ0	-

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Summary

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