Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ccr1l1 ENSRNOG00000006730

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Description

chemokine (C-C motif) receptor 1-like 1 [Source:RGD Symbol;Acc:1308007]

Gene Synonyms

LOC301088

Location

Primary_assembly 8: 123,589,621-123,612,687 reverse strand.

mRatBN7.2:CM026981.1

About this gene

This gene has 3 transcripts (splice variants), 290 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114047.1	Ccr1l1-202	3372	356aa	ENSRNOP00000079629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZFW8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000117179.1	Ccr1l1-203	3203	356aa	ENSRNOP00000085920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZFW8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000008783.3	Ccr1l1-201	3198	356aa	ENSRNOP00000008783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZFW8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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