Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Zhx1 ENSRNOG00000006412

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Description

zinc fingers and homeoboxes 1 [Source:RGD Symbol;Acc:620010]

Location

Primary_assembly 7: 91,473,836-91,501,115 reverse strand.

GRCr8:CM070397.1

About this gene

This gene has 5 transcripts (splice variants), 243 orthologues, 3 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000100253.2	Zhx1-203	3553	873aa	ENSRNOP00000079266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HRJ3 G3V6S9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000112281.2	Zhx1-204	2942	873aa	ENSRNOP00000084155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HRJ3 G3V6S9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000117985.2	Zhx1-205	2932	873aa	ENSRNOP00000081548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HRJ3 G3V6S9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000008454.6	Zhx1-201	2880	873aa	ENSRNOP00000008454.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HRJ3 G3V6S9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000095340.2	Zhx1-202	2852	873aa	ENSRNOP00000090025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HRJ3 G3V6S9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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