Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Synj2bp ENSRNOG00000006399

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Description

synaptojanin 2 binding protein [Source:RGD Symbol;Acc:69400]

Gene Synonyms

NPW16, Omp25

Location

Primary_assembly 6: 106,920,970-106,966,543 reverse strand.

GRCr8:CM070396.1

About this gene

This gene has 4 transcripts (splice variants), 197 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000009122.8	Synj2bp-201	5811	145aa	ENSRNOP00000009119.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JDM8 Q9WVJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000161344.1	Synj2bp-204	5989	131aa	ENSRNOP00000104761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000138579.1	Synj2bp-203	5917	142aa	ENSRNOP00000110478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000115470.2	Synj2bp-202	359	40aa	ENSRNOP00000094045.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL95 A6JDM9	-

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Summary

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