Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: St18 ENSRNOG00000006200

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Description

ST18 C2H2C-type zinc finger transcription factor [Source:RGD Symbol;Acc:708566]

Gene Synonyms

NZF-3, Nzf3, r-MyT3

Location

Primary_assembly 5: 17,371,000-17,458,676 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 4 transcripts (splice variants), 210 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000059625.5	St18-201	3842	1044aa	ENSRNOP00000056380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZTP6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000159649.1	St18-204	3866	954aa	ENSRNOP00000109462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000137537.1	St18-203	3811	1016aa	ENSRNOP00000104593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000092104.3	St18-202	3788	1026aa	ENSRNOP00000075382.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KAF8	-

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Summary

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