Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Trim54 ENSRNOG00000006146

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Description

tripartite motif-containing 54 [Source:RGD Symbol;Acc:1306453]

Gene Synonyms

LOC362708, Rnf30

Location

Primary_assembly 6: 30,959,306-30,978,475 reverse strand.

GRCr8:CM070396.1

About this gene

This gene has 1 transcript (splice variant), 147 orthologues and 62 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000008113.8	Trim54-201	1411	364aa	ENSRNOP00000008113.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HA76 Q5XIH6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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