Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cntn3 ENSRNOG00000006144

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Description

contactin 3 [Source:RGD Symbol;Acc:3253]

Gene Synonyms

BIG-1, Pang

Location

Primary_assembly 4: 136,398,572-136,770,717 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 5 transcripts (splice variants), 124 orthologues, 35 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000155072.1	Cntn3-204	3120	1039aa	ENSRNOP00000110911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9N6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000171913.1	Cntn3-205	4138	982aa	ENSRNOP00000110075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000008221.8	Cntn3-201	4126	1028aa	ENSRNOP00000008221.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62682	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000134743.1	Cntn3-203	4039	999aa	ENSRNOP00000111925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000123239.1	Cntn3-202	3120	1022aa	ENSRNOP00000099826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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