Gene: Runx1t1 ENSRNOG00000005673

Description

RUNX1 partner transcriptional co-repressor 1 [Source:RGD Symbol;Acc:1305490]

Gene Synonyms

Cbfa2t1, LOC362489

Location

Primary_assembly 5: 31,984,855-32,132,855 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 5 transcripts (splice variants), 211 orthologues, 2 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000078102.3	Runx1t1-202	3537	686aa	ENSRNOP00000071431.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0G0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000066191.3	Runx1t1-201	3364	577aa	ENSRNOP00000063830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6II90 D3ZWZ8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000094571.2	Runx1t1-203	3291	604aa	ENSRNOP00000090913.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AB42	-
ENSRNOT00000111262.2	Runx1t1-204	3231	584aa	ENSRNOP00000081192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G5L4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000148662.1	Runx1t1-205	3176	617aa	ENSRNOP00000100335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Gene: Runx1t1 ENSRNOG00000005673

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Gene: Runx1t1 ENSRNOG00000005673

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