Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: C5h8orf34 ENSRNOG00000005375

.

Description

similar to human chromosome 8 open reading frame 34 [Source:RGD Symbol;Acc:1564053]

Gene Synonyms

LOC500390, RGD1564053

Location

Primary_assembly 5: 12,021,007-12,559,772 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000066254.5	C5h8orf34-201	2842	462aa	ENSRNOP00000060947.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZPH6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000096147.2	C5h8orf34-202	2794	446aa	ENSRNOP00000078997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLX5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000164316.1	C5h8orf34-203	2713	419aa	ENSRNOP00000111368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.