Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Map7d2 ENSRNOG00000005176

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Description

MAP7 domain containing 2 [Source:RGD Symbol;Acc:1564852]

Gene Synonyms

LOC317508, Mtap7d2, RGD1564852

Location

Primary_assembly X: 39,181,091-39,296,695 reverse strand.

GRCr8:CM070411.1

About this gene

This gene has 5 transcripts (splice variants), 211 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000045285.8	Map7d2-201	4067	763aa	ENSRNOP00000042347.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A4L4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110899.2	Map7d2-203	4010	744aa	ENSRNOP00000086855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4J6	-
ENSRNOT00000126569.1	Map7d2-204	3992	738aa	ENSRNOP00000106913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000108099.2	Map7d2-202	3968	730aa	ENSRNOP00000077197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZJE8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000173300.1	Map7d2-205	1389	463aa	ENSRNOP00000112640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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