Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Sgpp1 ENSRNOG00000005175

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Description

sphingosine-1-phosphate phosphatase 1 [Source:RGD Symbol;Acc:727829]

Gene Synonyms

LOC81536, Spp1

Location

Primary_assembly 6: 100,161,024-100,182,259 reverse strand.

GRCr8:CM070396.1

About this gene

This gene has 2 transcripts (splice variants), 269 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000006913.8	Sgpp1-201	3321	430aa	ENSRNOP00000006913.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HC84 F1LPB0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000171432.1	Sgpp1-202	2403	400aa	ENSRNOP00000104948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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